Allon Klein, PhD

Associate Professor of Systems Biology, Harvard Medical School
Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species.
Authors: Authors: Zilionis R, Engblom C, Pfirschke C, Savova V, Zemmour D, Saatcioglu HD, Krishnan I, Maroni G, Meyerovitz CV, Kerwin CM, Choi S, Richards WG, De Rienzo A, Tenen DG, Bueno R, Levantini E, Pittet MJ, Klein AM.
Immunity
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Single-cell gene expression reveals a landscape of regulatory T cell phenotypes shaped by the TCR.
Authors: Authors: Zemmour D, Zilionis R, Kiner E, Klein AM, Mathis D, Benoist C.
Nat Immunol
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Universal patterns of stem cell fate in cycling adult tissues.
Authors: Authors: Klein AM, Simons BD.
Development
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Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data.
Authors: Authors: Wolock SL, Lopez R, Klein AM.
Cell Syst
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Clonal analysis of lineage fate in native haematopoiesis.
Authors: Authors: Rodriguez-Fraticelli AE, Wolock SL, Weinreb CS, Panero R, Patel SH, Jankovic M, Sun J, Calogero RA, Klein AM, Camargo FD.
Nature
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Cell-to-cell variability of alternative RNA splicing.
Authors: Authors: Waks Z, Klein AM, Silver PA.
Mol Syst Biol
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Quantitative Clonal Analysis and Single-Cell Transcriptomics Reveal Division Kinetics, Hierarchy, and Fate of Oral Epithelial Progenitor Cells.
Authors: Authors: Jones KB, Furukawa S, Marangoni P, Ma H, Pinkard H, D'Urso R, Zilionis R, Klein AM, Klein OD.
Cell Stem Cell
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Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex.
Authors: Authors: Hrvatin S, Hochbaum DR, Nagy MA, Cicconet M, Robertson K, Cheadle L, Zilionis R, Ratner A, Borges-Monroy R, Klein AM, Sabatini BL, Greenberg ME.
Nat Neurosci
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Patterning as a signature of human epidermal stem cell regulation.
Authors: Authors: Klein AM, Nikolaidou-Neokosmidou V, Doupé DP, Jones PH, Simons BD.
J R Soc Interface
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Homeostatic Epidermal Stem Cell Self-Renewal Is Driven by Local Differentiation.
Authors: Authors: Mesa KR, Kawaguchi K, Cockburn K, Gonzalez D, Boucher J, Xin T, Klein AM, Greco V.
Cell Stem Cell
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