Peter Park, PhD

Professor of Biomedical Informatics, Harvard Medical School
Estimating enrichment of repetitive elements from high-throughput sequence data.
Authors: Authors: Day DS, Luquette LJ, Park PJ, Kharchenko PV.
Genome Biol
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Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes.
Authors: Authors: Tolstorukov MY, Kharchenko PV, Goldman JA, Kingston RE, Park PJ.
Genome Res
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Normalization and experimental design for ChIP-chip data.
Authors: Authors: Peng S, Alekseyenko AA, Larschan E, Kuroda MI, Park PJ.
BMC Bioinformatics
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Combining gene expression data from different generations of oligonucleotide arrays.
Authors: Authors: Hwang KB, Kong SW, Greenberg SA, Park PJ.
BMC Bioinformatics
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Small-Molecule and CRISPR Screening Converge to Reveal Receptor Tyrosine Kinase Dependencies in Pediatric Rhabdoid Tumors.
Authors: Authors: Oberlick EM, Rees MG, Seashore-Ludlow B, Vazquez F, Nelson GM, Dharia NV, Weir BA, Tsherniak A, Ghandi M, Krill-Burger JM, Meyers RM, Wang X, Montgomery P, Root DE, Bieber JM, Radko S, Cheah JH, Hon CS, Shamji AF, Clemons PA, Park PJ, Dyer MA, Golub TR, Stegmaier K, Hahn WC, Stewart EA, Schreiber SL, Roberts CWM.
Cell Rep
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Linking transcriptional and genetic tumor heterogeneity through allele analysis of single-cell RNA-seq data.
Authors: Authors: Fan J, Lee HO, Lee S, Ryu DE, Lee S, Xue C, Kim SJ, Kim K, Barkas N, Park PJ, Park WY, Kharchenko PV.
Genome Res
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Engineering and Functional Characterization of Fusion Genes Identifies Novel Oncogenic Drivers of Cancer.
Authors: Authors: Lu H, Villafane N, Dogruluk T, Grzeskowiak CL, Kong K, Tsang YH, Zagorodna O, Pantazi A, Yang L, Neill NJ, Kim YW, Creighton CJ, Verhaak RG, Mills GB, Park PJ, Kucherlapati R, Scott KL.
Cancer Res
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Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma.
Authors: Authors: Chen F, Zhang Y, Senbabaoglu Y, Ciriello G, Yang L, Reznik E, Shuch B, Micevic G, De Velasco G, Shinbrot E, Noble MS, Lu Y, Covington KR, Xi L, Drummond JA, Muzny D, Kang H, Lee J, Tamboli P, Reuter V, Shelley CS, Kaipparettu BA, Bottaro DP, Godwin AK, Gibbs RA, Getz G, Kucherlapati R, Park PJ, Sander C, Henske EP, Zhou JH, Kwiatkowski DJ, Ho TH, Choueiri TK, Hsieh JJ, Akbani R, Mills GB, Hakimi AA, Wheeler DA, Creighton CJ.
Cell Rep
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Evaluation of somatic copy number estimation tools for whole-exome sequencing data.
Authors: Authors: Nam JY, Kim NK, Kim SC, Joung JG, Xi R, Lee S, Park PJ, Park WY.
Brief Bioinform
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Guided visual exploration of genomic stratifications in cancer.
Authors: Authors: Streit M, Lex A, Gratzl S, Partl C, Schmalstieg D, Pfister H, Park PJ, Gehlenborg N.
Nat Methods
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