Peter Park, PhD

Professor of Biomedical Informatics, Harvard Medical School
ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis.
Authors: Authors: Ho JW, Bishop E, Karchenko PV, Nègre N, White KP, Park PJ.
BMC Genomics
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MicroRNA mir-16 is anti-proliferative in enterocytes and exhibits diurnal rhythmicity in intestinal crypts.
Authors: Authors: Balakrishnan A, Stearns AT, Park PJ, Dreyfuss JM, Ashley SW, Rhoads DB, Tavakkolizadeh A.
Exp Cell Res
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Surface antigen phenotypes of hematopoietic stem cells from embryos and murine embryonic stem cells.
Authors: Authors: McKinney-Freeman SL, Naveiras O, Yates F, Loewer S, Philitas M, Curran M, Park PJ, Daley GQ.
Blood
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MSL complex is attracted to genes marked by H3K36 trimethylation using a sequence-independent mechanism.
Authors: Authors: Larschan E, Alekseyenko AA, Gortchakov AA, Peng S, Li B, Yang P, Workman JL, Park PJ, Kuroda MI.
Mol Cell
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CrossChip: a system supporting comparative analysis of different generations of Affymetrix arrays.
Authors: Authors: Kong SW, Hwang KB, Kim RD, Zhang BT, Greenberg SA, Kohane IS, Park PJ.
Bioinformatics
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Identification of somatic mutations in single cell DNA-seq using a spatial model of allelic imbalance.
Authors: Authors: Luquette LJ, Bohrson CL, Sherman MA, Park PJ.
Nat Commun
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The BabySeq project: implementing genomic sequencing in newborns.
Authors: Authors: Holm IA, Agrawal PB, Ceyhan-Birsoy O, Christensen KD, Fayer S, Frankel LA, Genetti CA, Krier JB, LaMay RC, Levy HL, McGuire AL, Parad RB, Park PJ, Pereira S, Rehm HL, Schwartz TS, Waisbren SE, Yu TW, Green RC, Beggs AH.
BMC Pediatr
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A Pan-Cancer Proteogenomic Atlas of PI3K/AKT/mTOR Pathway Alterations.
Authors: Authors: Zhang Y, Kwok-Shing Ng P, Kucherlapati M, Chen F, Liu Y, Tsang YH, de Velasco G, Jeong KJ, Akbani R, Hadjipanayis A, Pantazi A, Bristow CA, Lee E, Mahadeshwar HS, Tang J, Zhang J, Yang L, Seth S, Lee S, Ren X, Song X, Sun H, Seidman J, Luquette LJ, Xi R, Chin L, Protopopov A, Westbrook TF, Shelley CS, Choueiri TK, Ittmann M, Van Waes C, Weinstein JN, Liang H, Henske EP, Godwin AK, Park PJ, Kucherlapati R, Scott KL, Mills GB, Kwiatkowski DJ, Creighton CJ.
Cancer Cell
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Analyzing Somatic Genome Rearrangements in Human Cancers by Using Whole-Exome Sequencing.
Authors: Authors: Yang L, Lee MS, Lu H, Oh DY, Kim YJ, Park D, Park G, Ren X, Bristow CA, Haseley PS, Lee S, Pantazi A, Kucherlapati R, Park WY, Scott KL, Choi YL, Park PJ.
Am J Hum Genet
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EMSAR: estimation of transcript abundance from RNA-seq data by mappability-based segmentation and reclustering.
Authors: Authors: Lee S, Seo CH, Alver BH, Lee S, Park PJ.
BMC Bioinformatics
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